Index

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F

FAILED - Static variable in interface pt.ist.phylolib.data.IReader

FAILED - Static variable in interface pt.ist.phylolib.data.IWriter

FASTA - Class in pt.ist.phylolib.data.dataset

Responsible for parsing phylogenetic datasets from Strings in FASTA format.

FASTA() - Constructor for class pt.ist.phylolib.data.dataset.FASTA

File - Class in pt.ist.phylolib.data

Represents a file as a data type processor and a path.

File(Object, Path) - Constructor for class pt.ist.phylolib.data.File

Creates a file corresponding to the given data type processor and path.

FILE - pt.ist.phylolib.cli.Format

FINISHED - Static variable in interface pt.ist.phylolib.command.ICommand

FINISHED - Static variable in interface pt.ist.phylolib.data.IReader

FINISHED - Static variable in interface pt.ist.phylolib.data.IWriter

format() - Method in enum pt.ist.phylolib.cli.Option

Format - Enum in pt.ist.phylolib.cli

Enumerates the available formats with their respective regex.

from() - Method in class pt.ist.phylolib.data.tree.Edge

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